July 16, 2025

The Hidden Dangers of Long-Term PPI Use: Nitric Oxide Suppression and Cardiovascular Risk

While PPIs can offer short-term relief, their long-term use may impair nitric oxide, increase cardiovascular risk, and damage cellular health. Here's what to know.

The Hidden Dangers of Long-Term PPI Use: Nitric Oxide Suppression and Cardiovascular Risk

Proton Pump Inhibitors, Nitric Oxide, and Cardiovascular Risk: What You Need to Know

Proton pump inhibitors (PPIs) such as omeprazole, pantoprazole, and esomeprazole are among the most widely used medications in the world. Initially developed for short-term relief of acid-related gastrointestinal conditions like GERD, ulcers, and H. pylori infections, PPIs have evolved into long-term prescriptions for millions. But as more research accumulates, it’s becoming clear that chronic PPI use may come at a steep cost—particularly when it comes to cardiovascular and cellular health.

This article will explore the biochemical and clinical evidence that long-term PPI use may impair nitric oxide production, promote hypertension, increase cardiovascular risk, and even disrupt fundamental intracellular processes like lysosomal activity. We will also explore why PPIs should not be used as a crutch and why identifying and treating the root cause of reflux or heartburn is a far more sustainable strategy.

What Are Proton Pump Inhibitors (PPIs)?

PPIs are acid-suppressing drugs that block the final step of gastric acid production in the parietal cells of the stomach. They target and inhibit the H+/K+ ATPase enzyme (the "proton pump") responsible for secreting hydrochloric acid into the stomach lumen. By doing so, they drastically reduce stomach acidity.

Common PPIs include:

  • Omeprazole (Prilosec)

  • Esomeprazole (Nexium)

  • Lansoprazole (Prevacid)

  • Pantoprazole (Protonix)

  • Rabeprazole (AcipHex)

They are typically prescribed for conditions like:

  • Gastroesophageal reflux disease (GERD)

  • Peptic ulcers

  • Barrett’s esophagus

  • Zollinger-Ellison syndrome

  • NSAID-induced gastritis

The Original Intent: Short-Term Use

PPIs were never intended for lifelong use. Most FDA-approved labeling indicates an initial course of 4 to 8 weeks, depending on the condition being treated. In acute cases like erosive esophagitis or peptic ulcers, PPIs can promote healing and reduce complications. In fact, short-term use may be life-saving in certain scenarios, such as bleeding ulcers or during H. pylori eradication.

However, what started as a short-term solution has, for many, become a permanent fixture in their daily routine.

The Problem: Long-Term PPI Use and Its Consequences

Long-term use of PPIs, often without regular reevaluation, can lead to a cascade of negative health consequences. The best-known include:

  • Nutrient malabsorption (e.g., magnesium, calcium, B12, iron)

  • Increased risk for Clostridium difficile infection

  • Small intestinal bacterial overgrowth (SIBO)

  • Bone fractures due to reduced calcium absorption

Emerging research, however, points to deeper systemic effects—most notably involving nitric oxide and lysosomal function.

PPIs and Nitric Oxide Suppression

Nitric oxide (NO) is a crucial signaling molecule involved in vasodilation, blood pressure regulation, and endothelial health. It helps relax blood vessels, improves circulation, and plays a protective role in cardiovascular health. Reduced nitric oxide levels are associated with endothelial dysfunction, atherosclerosis, and hypertension.

So how do PPIs affect NO?

1. PPIs Alter Gastric pH, Affecting Nitrate-Nitrite-NO Pathway

Under normal conditions, dietary nitrates (found in leafy greens and beets) are converted to nitrites by oral bacteria. Once these nitrites reach the acidic environment of the stomach, they are reduced to nitric oxide. This is one of the body’s primary nitrate-dependent NO production pathways.

When stomach acid is suppressed by PPIs, this conversion process is significantly impaired, resulting in lower nitric oxide bioavailability. This is particularly concerning because nitrate-derived NO plays a key role in cardiovascular health.

2. Endothelial Dysfunction and Hypertension

With lower systemic nitric oxide levels, vasodilation is impaired. This can increase vascular resistance, elevate blood pressure, and promote endothelial inflammation—a precursor to cardiovascular disease.

Studies have shown that chronic PPI users have a significantly increased risk of:

  • Hypertension

  • Myocardial infarction

  • Stroke

  • Peripheral artery disease

This correlation becomes especially concerning when PPIs are used in patients already at risk for cardiovascular disease.

PPIs and Lysosomal Dysfunction

Lysosomes are the "recycling centers" of the cell. They contain enzymes that break down damaged proteins, pathogens, and cellular waste. Healthy lysosomal activity is essential for maintaining cellular homeostasis, autophagy, and overall cell viability.

Recent studies suggest that PPIs can impair lysosomal acidification, which is critical for their digestive function. By alkalinizing the internal pH of lysosomes, PPIs reduce the efficacy of enzymes like cathepsins, leading to accumulation of cellular debris and mitochondrial dysfunction.

Consequences of Impaired Lysosomal Function

  • Accelerated cellular aging

  • Accumulation of damaged proteins and lipids

  • Impaired immune response

  • Increased susceptibility to neurodegenerative diseases

This disruption may not produce immediate symptoms, but over time, it can contribute to systemic inflammation, oxidative stress, and degenerative disease.

Identifying the Underlying Cause: A Better Long-Term Strategy

Rather than chronically suppressing stomach acid with PPIs, the better approach is to uncover and address the root cause of the symptoms.

Common Root Causes of Heartburn and Reflux:

  • Hypochlorhydria (low stomach acid)

  • Hiatal hernia

  • H. pylori infection

  • Poor eating habits (late meals, overeating, processed foods)

  • Food sensitivities (gluten, dairy, etc.)

  • Obesity and abdominal pressure

  • Delayed gastric emptying

Functional medicine providers can use advanced testing and clinical insight to identify these drivers and develop individualized protocols.

Alternatives to Long-Term PPI Use

1. DGL (Deglycyrrhizinated Licorice)

Helps coat the stomach lining and reduce irritation without suppressing acid.

2. MucoShield (Zinc Carnosine)

Supports mucosal healing and has been shown to help with ulcers and gastric inflammation.

3. PH+ (Betaine HCl with pepsin)

In patients with low stomach acid (hypochlorhydria), this can restore proper digestion and reduce reflux caused by poor breakdown of food.

4. Digestive Enzymes

Aid in breaking down proteins, fats, and carbohydrates, relieving burden on the stomach and pancreas.

5. Lifestyle Interventions

  • Elevating the head of the bed

  • Weight loss

  • Avoiding trigger foods (spicy, acidic, caffeine)

  • Eating smaller, more frequent meals

  • Not lying down for 2-3 hours after eating

When Are PPIs Appropriate?

There are absolutely times when PPI use is warranted. Short courses for:

  • Active ulcers

  • Severe erosive esophagitis

  • Gastric protection with NSAID use

  • Acute H. pylori treatment protocols

  • Barrett's Esophagus

In these cases, PPIs can help patients avoid bleeding, strictures, and complications. But even then, they should be used with an exit strategy in mind.

Key Takeaways

  • PPIs reduce stomach acid but also impair nitric oxide production, which plays a vital role in cardiovascular health.

  • Nitric oxide suppression may increase the risk of hypertension, atherosclerosis, and stroke.

  • PPIs impair lysosomal activity, leading to impaired cellular waste removal and increased risk of aging and chronic disease.

  • They are best used short-term, in targeted scenarios where the benefits outweigh the risks.

  • Identifying and treating the underlying cause of GERD or reflux is a more sustainable and health-promoting strategy.

  • Natural alternatives and lifestyle modifications can help relieve symptoms without the long-term consequences of acid suppression.


References

  1. Ghebremariam, Y. T., et al. (2016). Proton pump inhibitors and vascular function: A mechanism-based perspective. American Journal of Physiology-Heart and Circulatory Physiology.

  2. Xie, Y., et al. (2017). Association of proton pump inhibitors with increased risk of cardiovascular events. BMJ.

  3. Shin, J. M., & Kim, N. (2013). Pharmacokinetics and pharmacodynamics of the proton pump inhibitors. Journal of Neurogastroenterology and Motility.

  4. Takahashi, Y., et al. (2020). Proton pump inhibitors inhibit lysosomal acidification and autophagic flux. Journal of Gastroenterology.

  5. Freston, J. W. (2004). Review article: The role of proton pump inhibitors in acute peptic ulcer bleeding. Alimentary Pharmacology & Therapeutics.

  6. Heidelbaugh, J. J. (2012). Proton pump inhibitors and risk of vitamin and mineral deficiency: evidence and clinical implications. Therapeutic Advances in Drug Safety.

  7. Moayyedi, P., et al. (2019). Safety of long-term PPI use: A literature review. Gut.